BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019H08LP1|AL427540
(860 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1561 1640 0.0
>3x_Contig1561
Length = 10959
Score = 1640 bits (818), Expect = 0.0
Identities = 843/860 (98%), Gaps = 1/860 (0%)
Strand = Plus / Plus
Query: 1 ttgarttcaaaactgattcagaacttgttatatccatctcaacgccaagtttttcaactt 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttgaattcaaaactgattcagaacttgttatatccatctcaacgccaagtttttcaactt 383
Query: 61 tcttttggracgttttcaatttggtagarattggttctggttgtcttctcaagaragcra 120
|||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||| |
Sbjct: 384 tcttttggaacgttttcaatttggtagaaattggttctggttgtcttctcaagaaagcaa 443
Query: 121 catctcccagggragtgaacaatcgagtagcaacggtattattcactttacgctctattt 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 catctcccagggaagtgaacaatcgagtagcaacggtattattcactttacgctctattt 503
Query: 181 ccgataaragggtcaaagctttagaacgttgtaaaatattcaaatcaactttaaccttct 240
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ccgataaaagggtcaaagctttagaacgttgtaaaatattcaaatcaactttaaccttct 563
Query: 241 cgtcatcgagagattccaaaaggggcaaagtcctgtataartcagcatttttggrgtkaa 300
|||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||
Sbjct: 564 cgtcatcgagagattccaaaaggggcaaagtcctgtataaatcagcatttttggagttaa 623
Query: 301 gcctacagcggtaaaattctttagccactgcctcaagtttctcaacaaactttgagcccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gcctacagcggtaaaattctttagccactgcctcaagtttctcaacaaactttgagcccg 683
Query: 361 aagctgaagatctctccaattcttgattaagcctgtsatgtgtcaatgaggtgtttggct 420
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 684 aagctgaagatctctccaattcttgattaagcctgtcatgtgtcaatgaggtgtttggct 743
Query: 421 tgacacgagtctcgcctatccacgttgtaacaatatcaragttttcaggcttcagttcat 480
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 744 tgacacgagtctcgcctatccacgttgtaacaatatcaaagttttcaggcttcagttcat 803
Query: 481 atatkatrctgacagtgtttgacagtttctcgggctgcaaacttaagaattcattcagag 540
|||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 atattatactgacagtgtttgacagtttctcgggctgcaaacttaagaattcattcagag 863
Query: 541 cggctggaagcaaaccaacagtcttctgtggcatgaagacagcgctagatcttttcctag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 cggctggaagcaaaccaacagtcttctgtggcatgaagacagcgctagatcttttcctag 923
Query: 601 ctcttctatccaaagatgaaccttcttcaatatggactgttacatcaacaacatgaaatc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 ctcttctatccaaagatgaaccttcttcaatatggactgttacatcaacaacatgaaatc 983
Query: 661 ctaattcaaggttaccgttgtcagtgtctcttaaatggaccgcataatcagaaacttcac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 984 ctaattcaaggttaccgttgtcagtgtctcttaaatggaccgcataatcagaaacttcac 1043
Query: 721 cagtttctgaaatggcaatgacaatttcataagtacgccttgttttgctttgctcttctg 780
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1044 cagtttctgaaatggcaatgacattttcataagtacgccttgttttgctttgctcttctg 1103
Query: 781 aaagcaatacaggtgcaaaactatctctctcctttgtacggtcctgaggggtctaaatat 840
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1104 aaagcaatacaggtgcaaaactatctctctcctttgtacggtcctga-gggtctaaatat 1162
Query: 841 tyatcacttaagaaattatt 860
| ||||||||||||||||||
Sbjct: 1163 tcatcacttaagaaattatt 1182
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5697
Number of Sequences: 1807
Number of extensions: 5697
Number of successful extensions: 126
Number of sequences better than 1.0e-20: 1
length of query: 860
length of database: 10,358,551
effective HSP length: 16
effective length of query: 844
effective length of database: 10,329,639
effective search space: 8718215316
effective search space used: 8718215316
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.8 bits)